Actualizar: Problema siendo rastreadoaquí

Editar: Puede que no sea el único con este problema. Me perdí esto, que también se publicó hoy y parece relacionado:El depurador PyCharm no funciona

A continuación se muestra un ejemplo mínimo que funciona bien tanto en Windows 7 como en Ubuntu 14.04 cuando se usa Pycharm Professional

PyCharm 2016.1
Build #PY-145.260, built on March 22, 2016
JRE: 1.8.0_60-b27 x86
JVM: Java HotSpot(TM) Server VM by Oracle Corporation

Ahora la parte súper extraña: en el depurador Pycharm de Ubuntu no tengo ningún problema. Sin embargo, en el depurador Pycharm de Windows obtengo el siguiente rastreo (¡aunque el código funciona bien cuando no se depura!):

Traceback (most recent call last):
  File "D:\Program Files (x86)\JetBrains\PyCharm 2016.1\helpers\pydev\pydevd.py", line 1530, in <module>
    globals = debugger.run(setup['file'], None, None, is_module)
  File "D:\Program Files (x86)\JetBrains\PyCharm 2016.1\helpers\pydev\pydevd.py", line 937, in run
    pydev_imports.execfile(file, globals, locals)  # execute the script
  File "C:/Users/Cornelis/PycharmProjects/SO-Help/test.py", line 11, in <module>
    class MainWindow(QtGui.QMainWindow):
  File "C:/Users/Cornelis/PycharmProjects/SO-Help/test.py", line 58, in MainWindow
    @QtCore.pyqtSlot(int, int)
AttributeError: 'module' object has no attribute 'pyqtSlot'
Backend TkAgg is interactive backend. Turning interactive mode on.

Ni siquiera sé cómo se supone que debocomienzo ¡depuración ya que nunca antes había visto algo así! ¿Qué significa si su programa funciona cuando lo ejecuta pero no cuando intenta depurarlo y, además, se depura bien en otro sistema operativo? ¿Puede esto ser solo un error de Pycharm? El seguimiento anterior no es exactamente idéntico a lo que obtengo en mi programa principal, pero es lo más cercano que podría obtener. A continuación se muestra el rastreo que veo en mi programa completo:

Backend TkAgg is interactive backend. Turning interactive mode on.
Traceback (most recent call last):
  File "D:\Program Files (x86)\JetBrains\PyCharm 2016.1\helpers\pydev\pydevd.py", line 1530, in <module>
    globals = debugger.run(setup['file'], None, None, is_module)
  File "D:\Program Files (x86)\JetBrains\PyCharm 2016.1\helpers\pydev\pydevd.py", line 937, in run
    pydev_imports.execfile(file, globals, locals)  # execute the script
  File "D:/Home/Documents/PycharmProjects/BMDanalyse/BMDanalyse/SPCanalyse.py", line 22, in <module>
    from ViewBoxCustom import MultiRoiViewBox, ImageAnalysisViewBox
  File "D:/Home/Documents/PycharmProjects/BMDanalyse/BMDanalyse\ViewBoxCustom.py", line 68, in <module>
    class MultiRoiViewBox(pg.ViewBox):
  File "D:/Home/Documents/PycharmProjects/BMDanalyse/BMDanalyse\ViewBoxCustom.py", line 71, in MultiRoiViewBox
    clicked = QtCore.pyqtSignal(int, int)
AttributeError: 'module' object has no attribute 'pyqtSignal'

Aquí está tu ejemplo mínimo. Simplemente copie y pegue y haga clic en ViewBox. Debería aparecer una imagen aleatoria si la ejecuta. Pero si lo depuras, explota.

import os, sys, matplotlib, matplotlib.pyplot
import numpy as np
from pyqtgraph.Qt import QtCore, QtGui
from pyqtgraph.widgets.GraphicsLayoutWidget import GraphicsLayoutWidget
import pyqtgraph as pg
import pyqtgraph.functions as fn

N = 256
ARR = np.random.random((N,N))*255

class MainWindow(QtGui.QMainWindow):

    def __init__(self, parent=None):

        QtGui.QMainWindow.__init__(self, parent)
        self.setupUserInterface()
        self.setupSignals()

    def setupUserInterface(self):
        """ Initialise the User Interface """
        # Left frame
        leftFrame = QtGui.QFrame()
        leftFrameLayout = QtGui.QHBoxLayout()
        leftFrame.setLayout(leftFrameLayout)
        leftFrame.setLineWidth(0)
        leftFrame.setFrameStyle(QtGui.QFrame.Panel)
        leftFrameLayout.setContentsMargins(0,0,5,0)

        # Left frame contents
        self.viewMain = GraphicsLayoutWidget()  # A GraphicsLayout within a GraphicsView
        leftFrameLayout.addWidget(self.viewMain)
        self.viewMain.setMinimumSize(200,200)
        self.vb = MultiRoiViewBox(lockAspect=True,enableMenu=True)
        self.viewMain.addItem(self.vb)
        self.vb.enableAutoRange()

        # Right frame
        self.sidePanel = SidePanel(self)

        # UI window (containing left and right frames)
        UIwindow         = QtGui.QWidget(self)
        UIwindowLayout   = QtGui.QHBoxLayout()
        UIwindowSplitter = QtGui.QSplitter(QtCore.Qt.Horizontal)
        UIwindowLayout.addWidget(UIwindowSplitter)
        UIwindow.setLayout(UIwindowLayout)
        self.setCentralWidget(UIwindow)
        UIwindowSplitter.addWidget(leftFrame)
        UIwindowSplitter.addWidget(self.sidePanel)

        self.setMinimumSize(600,500)
        self.resize(self.minimumSize())

    def setupSignals(self):
        """ Setup signals """
        # self.sidePanel.buttImageAdd.clicked.connect(self.showImage)
        self.vb.clicked.connect(self.on_vbc_clicked)

    @QtCore.pyqtSlot(int, int)
    def on_vbc_clicked(self, x, y):
        print(x)
        print(y)
        self.showImage()

    def showImage(self):
        """ Shows image in main view """
        self.vb.showImage(ARR)

class ViewMode():
    def __init__(self,id,cmap):
        self.id   = id
        self.cmap = cmap
        self.getLookupTable()
    def getLookupTable(self):
        lut = [ [ int(255*val) for val in self.cmap(i)[:3] ] for i in xrange(256) ]
        lut = np.array(lut,dtype=np.ubyte)
        self.lut = lut

class MultiRoiViewBox(pg.ViewBox):

    sigROIchanged = QtCore.Signal(object)
    clicked = QtCore.pyqtSignal(int, int)

    def __init__(self,parent=None,border=None,lockAspect=False,enableMouse=True,invertY=False,enableMenu=True,name=None):
        pg.ViewBox.__init__(self,parent,border,lockAspect,enableMouse,invertY,enableMenu,name)
        self.img      = None
        self.NORMAL   = ViewMode(0,matplotlib.cm.gray)
        self.DEXA     = ViewMode(1,matplotlib.cm.jet)
        self.viewMode = self.NORMAL

    def showImage(self,arr):
        if arr==None:
            self.img = None
            return
        if self.img==None:
            self.img = pg.ImageItem(arr,autoRange=False,autoLevels=False)
            self.addItem(self.img)
        self.img.setImage(arr,autoLevels=False)
        self.updateView()

    def updateView(self):
        self.background.setBrush(fn.mkBrush(self.viewMode.lut[0]))
        self.background.show()
        if    self.img==None: return
        else: self.img.setLookupTable(self.viewMode.lut)

    def mouseClickEvent(self, ev):
        if ev.button() == QtCore.Qt.RightButton and self.menuEnabled():
            ev.accept()
            self.raiseContextMenu(ev)
        elif ev.button() == QtCore.Qt.LeftButton:
            ev.accept()
            pos = self.mapToItem(self.img, ev.pos())
            self.clicked.emit(pos.x(), pos.y())

from pyqtgraph.Qt import QtCore,QtGui

class SidePanel(QtGui.QWidget):

    def __init__(self, parent=None):
        QtGui.QWidget.__init__(self,parent)
        self.setMinimumWidth(250)
        self.buttMinimumSize = QtCore.QSize(36,36)
        self.setupImageToolbox()
        sidePanelLayout = QtGui.QVBoxLayout()
        sidePanelLayout.addWidget(self.imageToolbox)
        sidePanelLayout.setContentsMargins(0,0,0,0)
        self.setLayout(sidePanelLayout)

    def setupImageToolbox(self):
        # Image buttons
        self.buttImageAdd  = QtGui.QPushButton()
        imageButtons       = [self.buttImageAdd]
        for i in xrange(len(imageButtons)):
            image = imageButtons[i]
            image.setMinimumSize(self.buttMinimumSize)

        self.imageFileTools  = QtGui.QFrame()
        imageFileToolsLayout = QtGui.QHBoxLayout()
        self.imageFileTools.setLayout(imageFileToolsLayout)
        self.imageFileTools.setLineWidth(1)
        self.imageFileTools.setFrameStyle(QtGui.QFrame.StyledPanel)
        imageFileToolsLayout.addWidget(self.buttImageAdd)

        # Image Toolbox (containing imageFileList + imageFileList buttons)
        self.imageToolbox = QtGui.QFrame()
        self.imageToolbox.setLineWidth(2)
        self.imageToolbox.setFrameStyle(QtGui.QFrame.Panel | QtGui.QFrame.Raised)
        imageToolboxLayout = QtGui.QVBoxLayout()
        self.imageToolbox.setLayout(imageToolboxLayout)
        imageToolboxLayout.addWidget(self.imageFileTools)


if __name__ == "__main__":
    app = QtGui.QApplication(sys.argv)
    window = MainWindow()
    window.show()
    sys.exit(app.exec_())