Тайм-аут соединения JDBC не может переподключиться

У меня есть веб-приложение Spring Hibernate, работающее на MySQL, которое доставляет мне неприятности.

Я искал и пробовал разные конфигурации, прочитал немало тем на этом сайте, но он все еще выскакивает с улыбающейся головой.

Сообщение об ошибке: Причина: com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Последний пакет, успешно полученный от сервера, был 63 313 144 миллисекунд назад. Последний пакет, успешно отправленный на сервер, был 63,313,144 миллисекунд назад. больше, чем сконфигурированное сервером значение wait_timeout. Чтобы избежать этой проблемы, следует рассмотреть возможность истечения срока действия и / или проверки допустимости соединения перед использованием в приложении, увеличения значений, настроенных сервером для тайм-аутов клиента, или использования свойства соединения Connector / J 'autoReconnect = true'

Caused by: com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: The last packet successfully received from the server was 63,313,144 milliseconds ago.  The last packet sent successfully to the server was 63,313,144 milliseconds ago. is longer than the server configured value of 'wait_timeout'. You should consider either expiring and/or testing connection validity before use in your application, increasing the server configured values for client timeouts, or using the Connector/J connection property 'autoReconnect=true' to avoid this problem.
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
    at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
    at com.mysql.jdbc.Util.handleNewInstance(Util.java:408)
    at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:1137)
    at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3965)
    at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2578)
    at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2758)
    at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2820)
    at com.mysql.jdbc.ConnectionImpl.setAutoCommit(ConnectionImpl.java:5359)
    at net.sf.log4jdbc.ConnectionSpy.setAutoCommit(ConnectionSpy.java:764)
    at com.mchange.v2.c3p0.impl.NewProxyConnection.setAutoCommit(NewProxyConnection.java:912)
    at org.hibernate.engine.transaction.internal.jdbc.JdbcTransaction.doBegin(JdbcTransaction.java:72)
    at org.hibernate.engine.transaction.spi.AbstractTransactionImpl.begin(AbstractTransactionImpl.java:162)
    at org.hibernate.internal.SessionImpl.beginTransaction(SessionImpl.java:1435)
    at org.hibernate.jpa.internal.TransactionImpl.begin(TransactionImpl.java:61)
    at org.springframework.orm.jpa.vendor.HibernateJpaDialect.beginTransaction(HibernateJpaDialect.java:159)
    at org.springframework.orm.jpa.JpaTransactionManager.doBegin(JpaTransactionManager.java:380)
    ... 46 more
Caused by: java.net.SocketException: Broken pipe
    at java.net.SocketOutputStream.socketWrite0(Native Method)
    at java.net.SocketOutputStream.socketWrite(SocketOutputStream.java:113)
    at java.net.SocketOutputStream.write(SocketOutputStream.java:159)
    at java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:82)
    at java.io.BufferedOutputStream.flush(BufferedOutputStream.java:140)
    at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3946)
    ... 58 more

Значение MySQL wait_timeout равно 28800.

Мой источник данных, c3p0 и конфигурация Hibernate:

@Bean
public DataSource dataSource() throws PropertyVetoException {
    ComboPooledDataSource dataSource = new ComboPooledDataSource();
    dataSource.setDriverClass(databaseProperties.getHibernateDriverClassName());
    dataSource.setJdbcUrl(databaseProperties.getDataSourceUrl());
    dataSource.setUser(databaseProperties.getDataSourceUsername());
    dataSource.setPassword(databaseProperties.getDataSourcePassword());
    dataSource.setAcquireIncrement(5);
    dataSource.setMaxStatementsPerConnection(20);
    dataSource.setMaxStatements(100);
    dataSource.setMinPoolSize(2);
    dataSource.setMaxPoolSize(5);
    return dataSource;
}

@Bean
public LocalContainerEntityManagerFactoryBean entityManagerFactory() throws PropertyVetoException {
    HibernateJpaVendorAdapter jpaVendorAdapter = new HibernateJpaVendorAdapter();
    jpaVendorAdapter.setDatabasePlatform(databaseProperties.getHibernateDialect());
    jpaVendorAdapter.setShowSql(true);
    jpaVendorAdapter.setGenerateDdl(false);

    Map<String, String> jpaPropertiesMap = new HashMap<String, String>();
    jpaPropertiesMap.put("hibernate.dialect", databaseProperties.getHibernateDialect());
    jpaPropertiesMap.put("hibernate.show_sql", "true");
    jpaPropertiesMap.put("hibernate.format_sql", "true");
    jpaPropertiesMap.put("hibernate.hbm2ddl.auto", databaseProperties.getHibernateHbm2ddlAuto());
    jpaPropertiesMap.put("hibernate.transaction.factory_class", "org.hibernate.transaction.JDBCTransactionFactory");
    jpaPropertiesMap.put("hibernate.ejb.naming_strategy", "org.hibernate.cfg.ImprovedNamingStrategy");
    jpaPropertiesMap.put("hibernate.c3p0.min_size", "5");
    jpaPropertiesMap.put("hibernate.c3p0.max_size", "20");
    jpaPropertiesMap.put("hibernate.c3p0.timeout", "1000");
    jpaPropertiesMap.put("c3p0.maxConnectionAge", "7200");
    jpaPropertiesMap.put("c3p0.maxIdleTime", "7200");
    jpaPropertiesMap.put("c3p0.unreturnedConnectionTimeout", "60");
    jpaPropertiesMap.put("c3p0.debugUnreturnedConnectionStackTraces", "true");
    jpaPropertiesMap.put("hibernate.c3p0.max_statements", "50");
    // Prevent JPA from converting the dates to the UTC time zone
    jpaPropertiesMap.put("jadira.usertype.autoRegisterUserTypes", "true");
    jpaPropertiesMap.put("jadira.usertype.databaseZone", "jvm");
    jpaPropertiesMap.put("jadira.usertype.javaZone", "jvm");

    LocalContainerEntityManagerFactoryBean factoryBean = new LocalContainerEntityManagerFactoryBean();
    factoryBean.setJpaVendorAdapter(jpaVendorAdapter);
    factoryBean.setPackagesToScan("com.nsn.nitro.project.data.jpa.domain");
    factoryBean.setJpaPropertyMap(jpaPropertiesMap);
    String[] mappingsResources = new String[] {"custom/typedef.hbm.xml"};        
    factoryBean.setMappingResources(mappingsResources);
    factoryBean.setDataSource(dataSource());
    return factoryBean;
}

Ошибка возникает, когда на следующее утро я возвращаюсь к веб-приложению, и к нему не обращались всю ночь.

Я понимаю, что MySQL wait_timeout - это количество секунд, в течение которых MySQL будет ожидать повторного использования соединения, прежде чем закрыть его.

Это означает, что мое веб-приложение пытается использовать соединение, срок действия которого истек и было закрыто на стороне MySQL, а мое веб-приложение все еще думает, что это допустимое соединение.

Я полагаю, что мне следует установить время ожидания соединения моего веб-приложения до того, как это сделает MySQL. Таким образом, веб-приложение не будет повторно использовать какое-либо соединение, уже превышенное по тайм-ауту и ​​закрытое на стороне MySQL, так как соединение уже было бы превышено по времени на стороне веб-приложения.

Такое ощущение, что вся моя конфигурация c3p0 из-за того, что время ожидания неиспользуемого соединения не выполняет свою работу.

Я использую следующий стек:

MySQL mysql-5.6.14
mysql-connector-java 5.1.32
Spring 4.1.0.RELEASE
spring-data-jpa 1.6.2.RELEASE
Hibernate 4.3.6.Final
hibernate-jpa-2.1-api 1.0.0.Final
C3P0 0.9.2.1

Что я делаю не так в моей конфигурации?

Или я должен явно закрывать соединения?

Вот как я настраивал репозитории:

public interface LanguageRepository extends GenericRepository<Language, Long> {
}

@Repository
@Transactional
public class GenericRepositoryImpl<T, ID extends Serializable> extends SimpleJpaRepository<T, ID> implements GenericRepository<T, ID> {

    private EntityManager entityManager;

    public GenericRepositoryImpl(JpaEntityInformation<T, ID> entityMetadata, EntityManager entityManager) {
        super(entityMetadata, entityManager);

        this.entityManager = entityManager;
    }

    public GenericRepositoryImpl(Class<T> domainClass, EntityManager entityManager) {
        super(domainClass, entityManager);

        this.entityManager = entityManager;
    }

    public EntityManager getEntityManager() {
        return entityManager;
    }

    @Override
    @Transactional
    public T deleteById(ID id) throws EntityNotFoundException {
        T entity = findOne(id);
        if (entity != null) {
            delete(entity);
        } else {
            throw new EntityNotFoundException("The entity could not be found and was not deleted");
        }
        return entity;
    }

}

public class GenericRepositoryFactoryBean<R extends JpaRepository<T, I>, T, I extends Serializable> extends JpaRepositoryFactoryBean<R, T, I> {

    protected RepositoryFactorySupport createRepositoryFactory(EntityManager entityManager) {
        return new BaseRepositoryFactory<T, I>(entityManager);
    }

    protected static class BaseRepositoryFactory<T, I extends Serializable> extends JpaRepositoryFactory {

        private EntityManager entityManager;

        public BaseRepositoryFactory(EntityManager entityManager) {
            super(entityManager);

            this.entityManager = entityManager;
        }

        @Override
        protected Object getTargetRepository(RepositoryMetadata metadata) {
            return new GenericRepositoryImpl<T, I>((JpaEntityInformation<T, I>) getEntityInformation(metadata.getDomainType()), entityManager);
        }

        @Override
        protected Class<?> getRepositoryBaseClass(RepositoryMetadata metadata) {
            return GenericRepositoryImpl.class;
        }
    }

}

@NoRepositoryBean
public interface GenericRepository<T, ID extends Serializable> extends JpaRepository<T, ID> {

    public EntityManager getEntityManager();

    public T deleteById(ID id) throws EntityNotFoundException;

}

Я не вижу ни метода close (), ни внедряемого, ни вызываемого там. Что-то отсутствует в моем коде?

РЕДАКТИРОВАТЬ: Добавлено ведение журнала для C3P0. Вот что выводится:

2014-10-17 14:29:00,464 INFO   [AbstractPoolBackedDataSource] Initializing c3p0 pool... com.mchange.
v2.c3p0.ComboPooledDataSource [ acquireIncrement -> 5, acquireRetryAttempts -> 30, acquireRetryDelay
 -> 1000, autoCommitOnClose -> false, automaticTestTable -> null, breakAfterAcquireFailure -> false,
 checkoutTimeout -> 0, connectionCustomizerClassName -> null, connectionTesterClassName -> com.mchan
ge.v2.c3p0.impl.DefaultConnectionTester, dataSourceName -> agvw3s958cggbnis1syx|1acb901, debugUnretu
rnedConnectionStackTraces -> false, description -> null, driverClass -> net.sf.log4jdbc.DriverSpy, f
actoryClassLocation -> null, forceIgnoreUnresolvedTransactions -> false, identityToken -> agvw3s958c
ggbnis1syx|1acb901, idleConnectionTestPeriod -> 0, initialPoolSize -> 3, jdbcUrl -> jdbc:log4jdbc:my
sql://127.0.0.1:3306/nitroproject, maxAdministrativeTaskTime -> 0, maxConnectionAge -> 0, maxIdleTim
e -> 0, maxIdleTimeExcessConnections -> 0, maxPoolSize -> 5, maxStatements -> 100, maxStatementsPerC
onnection -> 20, minPoolSize -> 2, numHelperThreads -> 3, preferredTestQuery -> null, properties -> 
{user=******, password=******}, propertyCycle -> 0, statementCacheNumDeferredCloseThreads -> 0, test
ConnectionOnCheckin -> false, testConnectionOnCheckout -> false, unreturnedConnectionTimeout -> 0, u
serOverrides -> {}, usesTraditionalReflectiveProxies -> false ] 
2014-10-17 14:29:00,479 DEBUG  [BasicResourcePool] incremented pending_acquires: 1 
2014-10-17 14:29:00,480 DEBUG  [BasicResourcePool] Starting acquisition series. Incremented pending_
acquires [1],  attempts_remaining: 30 
2014-10-17 14:29:00,480 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchr
onousRunner@11dbedc: Adding task to queue -- com.mchange.v2.resourcepool.BasicResourcePool$Scattered
AcquireTask@1dd75ae 
2014-10-17 14:29:00,481 DEBUG  [BasicResourcePool] incremented pending_acquires: 2 
2014-10-17 14:29:00,481 DEBUG  [BasicResourcePool] Starting acquisition series. Incremented pending_
acquires [2],  attempts_remaining: 30 
2014-10-17 14:29:00,482 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchr
onousRunner@11dbedc: Adding task to queue -- com.mchange.v2.resourcepool.BasicResourcePool$Scattered
AcquireTask@15083c7 
2014-10-17 14:29:00,482 DEBUG  [BasicResourcePool] incremented pending_acquires: 3 
2014-10-17 14:29:00,483 DEBUG  [BasicResourcePool] Starting acquisition series. Incremented pending_
acquires [3],  attempts_remaining: 30 
2014-10-17 14:29:00,483 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchr
onousRunner@11dbedc: Adding task to queue -- com.mchange.v2.resourcepool.BasicResourcePool$Scattered
AcquireTask@fbbf1d 
2014-10-17 14:29:00,511 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleMaxStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:00,523 DEBUG  [C3P0PooledConnectionPool] com.mchange.v2.c3p0.impl.C3P0PooledConnectionPool$1PooledConnectionResourcePoolManager@e38aca.acquireResource() returning.  
2014-10-17 14:29:00,523 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 [managed: 1, unused: 1, excluded: 0] 
2014-10-17 14:29:00,523 DEBUG  [BasicResourcePool] decremented pending_acquires: 2 
2014-10-17 14:29:00,523 DEBUG  [BasicResourcePool] Acquisition series terminated successfully. Decremented pending_acquires [2],  attempts_remaining: 30 
2014-10-17 14:29:00,521 DEBUG  [BasicResourcePool] com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 config: [start -> 3; min -> 2; max -> 5; inc -> 5; num_acq_attempts -> 30; acq_attempt_delay -> 1000; check_idle_resources_delay -> 0; mox_resource_age -> 0; max_idle_time -> 0; excess_max_idle_time -> 0; destroy_unreturned_resc_time -> 0; expiration_enforcement_delay -> 0; break_on_acquisition_failure -> false; debug_store_checkout_exceptions -> false] 
2014-10-17 14:29:00,523 DEBUG  [C3P0PooledConnectionPoolManager] Created new pool for auth, username (masked): 'ni******'. 
2014-10-17 14:29:00,523 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 [managed: 1, unused: 0, excluded: 0] (e.g. com.mchange.v2.c3p0.impl.NewPooledConnection@acde7c) 
2014-10-17 14:29:00,524 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleMaxStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:00,525 DEBUG  [C3P0PooledConnectionPool] com.mchange.v2.c3p0.impl.C3P0PooledConnectionPool$1PooledConnectionResourcePoolManager@e38aca.acquireResource() returning.  
2014-10-17 14:29:00,525 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 [managed: 2, unused: 1, excluded: 0] (e.g. com.mchange.v2.c3p0.impl.NewPooledConnection@acde7c) 
2014-10-17 14:29:00,525 DEBUG  [BasicResourcePool] decremented pending_acquires: 1 
2014-10-17 14:29:00,529 DEBUG  [BasicResourcePool] Acquisition series terminated successfully. Decremented pending_acquires [1],  attempts_remaining: 30 
2014-10-17 14:29:00,525 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleMaxStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:00,530 DEBUG  [C3P0PooledConnectionPool] com.mchange.v2.c3p0.impl.C3P0PooledConnectionPool$1PooledConnectionResourcePoolManager@e38aca.acquireResource() returning.  
2014-10-17 14:29:00,530 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 [managed: 3, unused: 2, excluded: 0] (e.g. com.mchange.v2.c3p0.impl.NewPooledConnection@acde7c) 
2014-10-17 14:29:00,530 DEBUG  [BasicResourcePool] decremented pending_acquires: 0 
2014-10-17 14:29:00,530 DEBUG  [BasicResourcePool] Acquisition series terminated successfully. Decremented pending_acquires [0],  attempts_remaining: 30 
2014-10-17 14:29:00,562 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleMaxStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:00,574 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchronousRunner@11dbedc: Adding task to queue -- com.mchange.v2.resourcepool.BasicResourcePool$1RefurbishCheckinResourceTask@1fec09e 
2014-10-17 14:29:00,574 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleMaxStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:00,575 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 [managed: 3, unused: 2, excluded: 0] (e.g. com.mchange.v2.c3p0.impl.NewPooledConnection@acde7c) 
2014-10-17 14:29:00,575 DEBUG  [NewProxyConnection] com.mchange.v2.c3p0.impl.NewProxyConnection@39069f: close() called more than once. 
2014-10-17 14:29:02,260 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePool@ad2e72 [managed: 3, unused: 2, excluded: 0] (e.g. com.mchange.v2.c3p0.impl.NewPooledConnection@acde7c) 
2014-10-17 14:29:03,111 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleMaxStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:03,112 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchronousRunner@11dbedc: Adding task to queue -- com.mchange.v2.resourcepool.BasicResourcePool$1RefurbishCheckinResourceTask@146219b 
2014-10-17 14:29:03,112 DEBUG  [GooGooStatementCache] checkinAll(): com.mchange.v2.c3p0.stmt.DoubleM
axStatementCache stats -- total size: 0; checked out: 0; num connections: 0; num keys: 0 
2014-10-17 14:29:03,113 DEBUG  [BasicResourcePool] trace com.mchange.v2.resourcepool.BasicResourcePo
ol@ad2e72 [managed: 3, unused: 2, excluded: 0] (e.g. com.mchange.v2.c3p0.impl.NewPooledConnection@acde7c) 
2014-10-17 14:29:03,262 DEBUG  [DefaultListableBeanFactory] Returning cached instance of singleton bean 'org.springframework.transaction.config.internalTransactionAdvisor' 
2014-10-17 14:29:03,285 DEBUG  [DefaultListableBeanFactory] Finished creating instance of bean 'entityManagerFactory' 

И тогда он зацикливает вывод этого:

2014-10-17 14:34:10,399 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchronousRunner$DeadlockDetector@70b40a -- Running DeadlockDetector[Exiting. No pending tasks.] 
2014-10-17 14:34:10,825 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchronousRunner$DeadlockDetector@15e34e2 -- Running DeadlockDetector[Exiting. No pending tasks.] 
2014-10-17 14:34:10,825 DEBUG  [ThreadPoolAsynchronousRunner] com.mchange.v2.async.ThreadPoolAsynchronousRunner$DeadlockDetector@15e34e2 -- Running DeadlockDetector[Exiting. No pending tasks.]

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